Protein ZmSBP10
ZmSBP10 is a protein in the SBP family.
Information
TF Name: ZmSBP10
Species: Maize
TF Family: SBP
Gene Name(Synonym): SBP1
Uniprot ID: B6TPH6
Subgenome: 1

Protein ZmSBP10

ZmSBP10 is a protein in the SBP family.

Overview of domains present in v5 transcripts
PF03110
Zm00001eb233670_T002
Zm00001eb233670_T001
Zm00001eb233670_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d015451DAPseq no logo sequence fimo position
Zm00001d015451DAPseq no logo sequence fimo position
Zm00001d015451ChIPseq no logo sequence fimo position
Zm00001d015451PChIPseq no logo sequence fimo position

Interactions where ZmSBP10 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmSBP10 is the target  
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There are 113 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb233670_T002 from maize genome v5

Amino Acid Sequence
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MQRVMSSLSLSFPLPSTQPFLTTHKGHHCFTLTRTRIARSLSVSAPPASCTHIHSESIVAVASRMMMNTNAMSPTASTDA
DFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQESGLLPPASLPLAPSPQS
MAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRTYFSPADVLAVDRLLTR
SRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKASAVAAAGKQQRFCQQCS
SRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGASNTAAAAISPNGSGVS
CLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVMQTTQQQHSGGGGAG
NILSCSSVSDQHNGGGCNGFFEVDFI

MQRVMSSLSLSFPLPSTQPFLTTHKGHHCFTLTRTRIARSLSVSAPPASCTHIHSESIVAVASRMMMNTNAMSPTASTDA
DFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQESGLLPPASLPLAPSPQS
MAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRTYFSPADVLAVDRLLTR
SRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKASAVAAAGKQQRFCQQCS
SRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGASNTAAAAISPNGSGVS
CLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVMQTTQQQHSGGGGAG
NILSCSSVSDQHNGGGCNGFFEVDFI

MQRVMSSLSLSFPLPSTQPFLTTHKGHHCFTLTRTRIARSLSVSAPPASCTHIHSESIVAVASRMMMNTNAMSPTASTDA
DFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQESGLLPPASLPLAPSPQS
MAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRTYFSPADVLAVDRLLTR
SRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKASAVAAAGKQQRFCQQCS
SRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGASNTAAAAISPNGSGVS
CLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVMQTTQQQHSGGGGAG
NILSCSSVSDQHNGGGCNGFFEVDFI

MQRVMSSLSLSFPLPSTQPFLTTHKGHHCFTLTRTRIARSLSVSAPPASCTHIHSESIVAVASRMMMNTNAMSPTASTDA
DFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQESGLLPPASLPLAPSPQS
MAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRTYFSPADVLAVDRLLTR
SRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKASAVAAAGKQQRFCQQCS
SRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGASNTAAAAISPNGSGVS
CLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVMQTTQQQHSGGGGAG
NILSCSSVSDQHNGGGCNGFFEVDFI

MQRVMSSLSLSFPLPSTQPFLTTHKGHHCFTLTRTRIARSLSVSAPPASCTHIHSESIVAVASRMMMNTNAMSPTASTDA
DFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQESGLLPPASLPLAPSPQS
MAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRTYFSPADVLAVDRLLTR
SRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKASAVAAAGKQQRFCQQCS
SRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGASNTAAAAISPNGSGVS
CLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVMQTTQQQHSGGGGAG
NILSCSSVSDQHNGGGCNGFFEVDFI

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF03110
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Nucleotide Sequence
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CTCCTGCCGGTGGCTTTACCAAAAT...

GRMZM2G111136_T01 from maize genome v3

Amino Acid Sequence
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MMMNTNAMSPTASTDADFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQES
GLLPPASLPLAPSPQSMAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRT
YFSPADVLAVDRLLTRSRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKAS
AVAAAGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKSASN
TAAAAISPNGSGVSCLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVM
QTTQQQHSGGGGAGNILSCSSVSDQHNGGGCNGFFEVDFI

Nucleotide Sequence
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CACACTCACACGCACACGTATAGCT...

GRMZM2G111136_T02 from maize genome v3


Related TFome: pUT6144

Amino Acid Sequence
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MMMNTNAMSPTASTDADFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQES
GLLPPASLPLAPSPQSMAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRT
YFSPADVLAVDRLLTRSRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKAS
AVAAAGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGAS
NTAAAAISPNGSGVSCLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLV
MQTTQQQHSGGGGAGNILSCSSVSDQHNGGGCNGFFEVDFI

Nucleotide Sequence
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CACACTCACACGCACACGTATAGCT...

Zm00001d015451_T001 from maize genome v4

Amino Acid Sequence
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MMMNTNAMSPTASTDADFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQES
GLLPPASLPLAPSPQSMAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRT
YFSPADVLAVDRLLTRSRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKAS
AVAAAGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGAS
NTAAAAISPNGSGVSCLDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLV
MQTTQQQHSGGGGAGNILSCSSVSDQHNGGGCNGFFEVDFI

Nucleotide Sequence
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ACACTCACACGCACACGTATAGCTC...

Zm00001d015451_T002 from maize genome v4

Amino Acid Sequence
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MDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVMQTTQQQHSGGGGAGNILS
CSSVSDQHNGGGCNGFFEVDFI

Nucleotide Sequence
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ACTCACACGCACACGTATAGCTCGA...

Zm00001eb233670_T001 from maize genome v5

Amino Acid Sequence
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MQRVMSSLSLSFPLPSTQPFLTTHKGHHCFTLTRTRIARSLSVSAPPASCTHIHSESIVAVASRMMMNTNAMSPTASTDA
DFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQESGLLPPASLPLAPSPQS
MAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRTYFSPADVLAVDRLLTR
SRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKASAVAAAGKQQRFCQQCS
RFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKTGASNTAAAAISPNGSGVSC
LDVMDNGQTSSAAAPTALSLAAPPPPPLHEKDGSLDSMLMQRVLQGRREDDDDEQRRHFITSLVMQTTQQQHSGGGGAGN
ILSCSSVSDQHNGGGCNGFFEVDFI

Nucleotide Sequence
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CTCCTGCCGGTGGCTTTACCAAAAT...

Zm00001eb233670_T003 from maize genome v5

Amino Acid Sequence
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MMMNTNAMSPTASTDADFSFGPLQPYVGFDVAGMGMPSVVVERSSSLLQHNTSSSSHNNNLGLYDSFDFAAAAGLPFQES
GLLPPASLPLAPSPQSMAAMAMPPSSLLLTLPGVPAAADVVYNPFGGGGAGGFLKREDGGPLVDAAGGGGRIGLNLGRRT
YFSPADVLAVDRLLTRSRLAGGGVGVGLGMGLGMGVLGLGAAHHQQPPPRCQAEGCKADLSAAKHYHRRHKVCEYHAKAS
AVAAAGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKPSSAQDEDSSPPPPKKLDTCITNTASYNDDLKSKKL
YTIRQKDAIATTCTTSSHLTLTTYIHMHSCMHARRQSFDVVRVLVWDQYILMHASDPTLHIYTDRCKLTPCYVHDQIDIC
CINVLRSLYILSLTVYSCTCTCRAWLLVATS

Nucleotide Sequence
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CACACTCACACGCACACGTATAGCT...


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